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    Home » Recipes » Cakes and Cupcakes

    Published: Nov 11, 2020 · Modified: Dec 2, 2020 by alexandra · This post may contain affiliate links

    Caramel Apple Cupcakes {gluten-free}

    Jump to Recipe
    Front-facing view of cupcakes on a plate with text overlay reading "Salted Caramel Apple Cupcakes {gluten-free}".

    If you’re a fan of caramel apples, you’ll love this festive fall cupcake recipe! Brown butter, brown sugar, and cinnamon add depth to these moist apple cupcakes, topped with a rich caramel buttercream frosting. For a little extra flair, finish them with a salted caramel drizzle and apple garnish.

    This post is sponsored by Sprouts. As always, all thoughts and opinions are my own.


    When it comes to fall desserts - or really, fall recipes in general - apples don't seem to get all the attention they deserve. Pumpkin always steals the spotlight, and people seem to forget that this is also the season when allll the apples are ripe and ready for picking! These Salted Caramel Apple Cupcakes are here to change that. They're moist, they're fluffy, they're topped with the most luxurious caramel cream cheese frosting, and they taste like fall. Top them with a thick drizzle of salted caramel sauce and an apple slice for garnish, and I guarantee you'll wonder why you don't bake with apples more often.

    So let's talk details. Because I really wanted to amplify the rich, cozy flavors of fall in this caramel apple cupcake recipe, I used brown butter, brown sugar, and a dash of cinnamon in the cake batter. Then, I made a basic (but ever-versatile) caramel sauce to whip into a tangy-sweet cream cheese frosting. With a sprinkle of fleur de sel on top, it makes the perfect salty-sweet pairing for these cupcakes. If you love caramel apples (or salted desserts!) this will be right up your alley.

    Front-facing view of apple cupcakes on a plate, set atop a light pink linen. this recipe

    Do I have you convinced yet? Good! Here's everything you need to know to bake a perfect batch of these caramel apple cupcakes.

    Jump to:
    • Tips for making apple cupcakes
    • What type of apples to use for this recipe
    • Tips for making caramel sauce
    • Tips & tricks for a perfect cream cheese frosting
    • How to decorate these cupcakes
    • More apple recipes
    • Recipe Card
    • 💬 Comments and Reviews

    Tips for making apple cupcakes

    There are a few basic guidelines that often come into play when baking cupcakes, and they stand true here:

    Use room temperature ingredients: Most batters turn out best when all ingredients start at room temperature. This helps them emulsify properly, which it turn helps the batter bake properly. For this recipe, it's important that your brown butter, eggs, and buttermilk are all at room temperature. Tip: To quickly bring eggs to room temperature, put them in a bowl, cover with warm water, and let sit for about 10 minutes before using.

    Follow proper mixing methods: With cupcake recipes, it's particularly important to follow the mixing method instructed. After beating together the butter and sugar, beat in the eggs one at a time. This will ensure that each one gets fully emulsified into the batter. Then, alternate adding the buttermilk and flour mixture in three parts, starting and ending with the dry ingredients. The flour coats the fat in the batter allowing for better incorporation of the buttermilk, while the buttermilk prevents the batter from getting too thick too quickly. This is the most effective way to combine the ingredients and wind up with a light, tender cupcake crumb.

    It may be tempting to brush over mixing instructions when you're baking, but they're there for a reason! Since gluten-free baked goods have a tendency to be dry or dense, we pull out all the stops to avoid that in these apple cupcakes.

    Toss the fruit in flour before adding to the batter. The flour will absorb some of the liquid content of the apples, and prevent them from sinking to the bottom of the cupcakes. I've found that it's best to use finely minced apples for this recipe. Shredding the apples makes them too wet, while chopping them yields more of a muffin-like texture in the final product.

    Overhead view of cupcakes on a grey plate, surrounded by apple slices, extra cupcakes, and a pink linen.

    What type of apples to use for this recipe

    The apples you see here are Lucyglos (available at Sprouts!), and I highly recommend them. They're a cross between a Honeycrisp and an Arlie Red - crisp enough to hold up to baking, with a sweet-tart flavor that pairs perfectly with the salty-sweet flavor of these cupcakes. And my absolute FAVORITE part about them is their color. They're blushing gold on the outside, with a stunning pinkish-red marbled flesh. When they're sliced, they add such a unique twist to the garnish on these cupcakes!

    If you can't get your hands on Lucyglo apples, you could also experiment with something like a Sugarbee or Granny Smith; the Kanzi variety I use in my apple muffins would also be a great choice. You can find a great variety of different apples at your local Sprouts! Just look for one that's crisp and has at least a bit of tartness.

    Tips for making caramel sauce

    Aside from the apples, the other starring component of these cupcakes is a homemade salted caramel sauce. I based it off my go-to caramel recipe, but swapped the milk for heavy cream to make an extra-thick caramel that's perfect for frosting and piping. While this caramel isn't very difficult to make, it does take some attention to detail. If this is your first time making caramel, I highly recommend that you read through my post on caramel sauce (linked above). These 10 tips for making caramel would also be helpful.

    Once you've made the caramel sauce, make sure it cools to room temperature before using. If needed, you can place it in the fridge, but be sure to stir it often, and take it out if it starts to get too thick. At the perfect consistency, you should be able to drizzle it out of a piping bag.

    Front-facing view of a cupcake being removed from its liner, with extra cupcakes, apple slices, and glasses of milk in the background.

    Tips & tricks for a perfect cream cheese frosting

    The salted caramel buttercream used for these cupcakes is based on a basic cream cheese frosting, much like the one I use for my pumpkin cupcakes. It's easy to make, but (like always!) there's a few tips you can follow to make sure it turns out perfectly smooth, thick, and ready for piping:

    Use a 1:1:2 ratio of butter to caramel to powdered sugar (by weight). Remember this, and you'll never need to look up a frosting recipe again! I find that this ratio works really well to make a frosting with a good consistency for decorating, and a noticeable cream cheese tang.

    Use room temperature butter and cold, brick-style cream cheese. You should be able to press a fingertip into your butter and make a light indent, but it shouldn't be much softer than that. Cut it into chunks before using so that it's easier to beat.

    The cream cheese, on the other hand, should be in a block or brick form, and used straight from the refrigerator. Together, these two ingredients will make a thick frosting that can easily hold up to piping.

    Start with the paddle attachment, and end with the wire whip. Use a stand mixer fitted with the paddle attachment to beat together the butter and cream cheese, just until they're smoothly combined. Once you add the powdered sugar, vanilla extract, salt, and (in this case) caramel sauce, switch to the wire whip. This will help create a thick, fluffy frosting. Whatever you do, don't be tempted to over-beat the mixture! Otherwise, it can split or turn runny.

    If your frosting still looks too runny, chill it briefly before using. Sometimes, on a warm day, you can follow all of the best advice and still end up with a cream cheese frosting that's too soft. If this happens, transfer it to the refrigerator and let it chill for 20-30 minutes before you start decorating.

    Front-facing view of apple cupcakes on a plate, set atop a light pink linen. A tiny bowl of salt and apple slices are visible in the outer frame.

    How to decorate these cupcakes

    To decorate these caramel apple cupcakes just like you see in the photos, here's what you'll need:

    Piping bag fitted with a large, open star tip - Use this to pipe the salted caramel buttercream onto these cupcakes.

    Second piping bag, with a small round tip - This is for piping extra salted caramel sauce over the frosting on each cupcake. Alternatively, you can make your own parchment piping bag and just use that.

    Thinly sliced apples - The Lucyglo apples I used were so pretty that I just had to add them as a cupcake-topper. It's not mandatory, but highly recommended! If you decide to do this, cut the apples into thin slices, and then cut each slice in half. Gently press a piece into the top of each cupcake.

    More apple recipes

    If you're stocking up on apples for this recipe, you might as well make a few other goodies at the same time, right?! Here are some other recipes to try:

    Spiced Apple Muffins with Apple Cinnamon Glaze - These light, tender apple muffins are filled with cozy fall spices and topped with the most amazing glaze. It tastes just like apple cider!

    Ginger Turmeric Juice Shots - Green apples add just enough sweetness to balance out the lemons in this antioxidant-packed juicer recipe. It's a great one if you're trying to incorporate more immune-boosting ingredients into your diet for the winter months.

    Apple Cinnamon Energy Bars - If healthy snacks are your bread and butter (or if you just need something to balance out these cupcakes!) these easy-to-make energy bars are just the thing. They're loaded with apples and toasted pecans, and naturally sweetened with dates.

    Overhead view of cupcakes on a grey plate, surrounded by apple slices, extra cupcakes, and a pink linen.
    Print

    Recipe Card

    Salted Caramel Apple Cupcakes {gluten-free}

    Front-facing view of apple cupcakes on a plate, set atop a light pink linen. A tiny bowl of salt and apple slices are visible in the outer frame.
    Print Recipe
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    ★★★★★

    5 from 5 reviews

    If you’re a fan of caramel apples, you’ll love this festive fall cupcake recipe! Brown butter, brown sugar, and cinnamon add depth to these moist apple cupcakes, topped with a rich caramel buttercream frosting. For a little extra flair, finish them with a salted caramel drizzle and apple garnish.

    • Author: Alex Azary
    • Prep Time: 1 hour 5 minutes
    • Cook Time: 15-18 minutes
    • Total Time: 2 hours 23 minutes*
    • Yield: 15 cupcakes 1x
    • Category: cupcakes
    • Method: baking
    • Diet: Gluten Free

    Ingredients

    Scale

    Salted Caramel Sauce

    • 1 cup (7 ounces) granulated sugar
    • 1 cup (8 ¼ ounces) heavy cream
    • ¼ teaspoon salt 

    Apple Cupcakes:

    • 6 tablespoons (3 ounces) unsalted butter, cut into chunks
    • 1 ⅓ cups, spoon and level (5 ⅝ ounces) + 2 tablespoons gluten-free all-purpose flour with xanthan gum, divided use
    • 1 ½ teaspoons baking powder
    • ¼ teaspoon salt
    • ¼  teaspoon baking soda
    • ⅛ teaspoon cinnamon
    • ½ cup (3 ½ ounces) granulated sugar
    • ¼ cup, packed (1 ⅞ ounces) brown sugar
    • 2 eggs, room temperature
    • ½ cup (4 ¼ ounces) buttermilk, room temperature
    • 1 teaspoon vanilla extract
    • 1 cup (4 ½ ounces) peeled and minced Lucyglo apples

    Salted Caramel Buttercream Frosting:

    • 12 tablespoons (6 ounces) unsalted butter, softened and cut into chunks
    • 6 ounces brick-style cream cheese
    • 6 tablespoons Salted Caramel Sauce 
    • 3 cups (12 ounces) powdered/confectioner's sugar
    • ¾ teaspoon vanilla extract
    • pinch of salt
    • Lucyglo apples, sliced (for garnish)
    • Flaky sea salt or fleur de sel (for garnish, optional)

     

    Instructions

    Salted Caramel Sauce**:

    1. Add granulated sugar to a large, heavy-bottomed pot. Shake pot gently to spread sugar out in a thin, even layer across the bottom surface. Set on stove over medium-low heat and leave untouched as the sugar heats up and begins to melt. This step usually takes about 10 minutes, but the time can vary; watch it closely!
    2. Once the sugar is just beginning to melt, pour heavy cream into a microwave-safe container and microwave for about 1 minute, until very warm but not quite boiling.  Set aside nearby.
    3.  As the sugar melts, use a heat-safe spatula to gently push the melted sugar over the unmelted sugar; avoid excessive stirring. Continue to let cook until all of the sugar has liquified. Once this happens, begin to stir continuously, and cook just long enough for the melted sugar to reach a deep rust color. 
    4.  Once the sugar is melted and caramelized, slowly pour in the warm cream while stirring. Be extremely careful while doing this - the caramel will boil and produce very hot steam. (You may want to wear an oven mitt on the hand that will be stirring.) Continue to stir as the bubbling subsides, and cook for about 2 more minutes. At this point, the caramel should be noticeably thicker. 
    5. Remove caramel from heat and carefully pour into a mason jar (place a metal spoon in the jar to prevent it from shattering). Stir in salt. Set aside to cool to room temperature; it should thicken to a pipeable consistency once cool. 

    Apple Cupcakes:

    1. Preheat oven to 350°F with racks in the top and bottom-third positions. Line two muffin pans with cupcake liners (this recipe makes enough for 15 cupcakes). 
    2. Place unsalted butter in a small skillet set over medium-low heat. Allow to cook, whisking occasionally, until the butter melts and begins to foam. Once foaming, whisk constantly until the butter turns golden-brown. Remove from heat and transfer to a large mixing bowl. Set aside to cool for at least 10 minutes. Meanwhile, prep the dry ingredients.
    3. In a second, medium mixing bowl, whisk together 1 ⅓ cups (5 ⅝ ounces) flour with the baking powder, salt, baking soda, and cinnamon. Set aside.
    4. Add granulated sugar and brown sugar to the melted butter. Use a hand mixer to beat on medium speed for 30-60 seconds, until well-combined. Add the eggs one at a time, beating each in until incorporated. Continue beating for about another 30 seconds, until the mixture is slightly paler in color. 
    5. In a liquid measuring cup, combine buttermilk and vanilla extract.
    6. With the mixer on low speed, add ⅓ of the dry ingredients to the batter, followed by ½ of the buttermilk mixture. Continue alternating between the two, mixing as you go, and ending with the final portion of the dry ingredients. Mix just until the batter comes together evenly; do not overmix.
    7. In a small bowl, toss the apples with the remaining 2 tablespoons flour, to coat. Add to the batter and fold in by hand just until evenly dispersed.
    8. Divide batter evenly between the 15 cupcake liners, filling each about ⅔ full. Gently smooth out the surface of each cupcake. Transfer to preheated oven and cook for 15-18 minutes, switching and rotating the pans halfway through. The muffins should be nicely domed when done, and a toothpick inserted into the center of one should come out clean, or with just a few moist crumbs. 
    9. Allow muffins to cool in pans for about 10 minutes, and then transfer to a wire rack to cool completely before frosting. 

    Salted Caramel Buttercream Frosting:

    1. In the bowl of a stand mixer fitted with the paddle attachment, combine the butter and cream cheese. Beat on low speed until smooth and well-combined. 
    2. Scrape down the bowl and beater and add 6 tablespoons of the cooled salted caramel sauce, along with the powdered sugar, vanilla extract, and salt. Switch to the whip attachment and beat on medium-low speed, just until all ingredients are evenly combined and the frosting is thick, fluffy, and smooth. 
    3. Spread or pipe frosting onto the cooled cupcakes. Transfer the remaining salted caramel sauce to a piping bag fitted with a small round tip, and drizzle caramel over frosted cupcakes. Garnish each cupcake with a small apple slice, and a sprinkle of salt, if desired. 
    4. Cupcakes are best served fresh, but keep well in the refrigerator for 3-5 days. Store leftovers in an airtight container. 

     

    Notes

    *Total time does not include any chilling time. 

    **If you've never made caramel before, or are new to using the dry method, I highly recommend reading through this post on caramel sauce. 

    Keywords: caramel apple cupcakes, salted caramel apple cupcakes, gluten-free apple cupcakes, caramel cream cheese frosting, fall desserts, Thanksgiving recipes

    Have you made this recipe?

    Tag @brighteyedbaker on Instagram and hashtag it #brighteyedbaker

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    1. Alex says

      November 11, 2020 at 4:34 pm

      Wow you did it again! These are mouthwatering cupcakes. I wish Sprouts would have offered them in their baking departments. I'd travel a good distance to buy a couple of dozens.

      I hate to make your blog political but I think you can even get DT out of the WH if you entice him with a dozen of these Cupcakes! :-)

      ps. Unbelievable pictures, great job!

      ★★★★★

      Reply
    2. Greg says

      November 11, 2020 at 12:22 pm

      These taste exactly like those Carmel apple pops every 90’s kid grew up on, except way better than a cheap piece of candy. 10/10 would recommend

      ★★★★★

      Reply
    3. maryam a says

      November 11, 2020 at 11:22 am

      Yes!!!! I love everything from Bright Eyed Baker but especially these! This recipe is everything I'm looking for, thank you thank you.

      ★★★★★

      Reply
    4. Mario A says

      November 11, 2020 at 11:11 am

      Love this recipe! Lucyglo apples are the best, this is perfect for fall.

      ★★★★★

      Reply
    5. sandra says

      November 11, 2020 at 11:10 am

      These are beautiful. The apples make it - how unique the color! Good job! I can't wait to try these.

      ★★★★★

      Reply

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    Hey There! Thanks for stopping by! Here's what you can expect to find on Bright-Eyed Baker: lots of baked goods and other sweets made from scratch (many of which are gluten-free), plus the occasional savory recipe or mixed drink. My goal is to show you that from-scratch baking - gluten-free or not! - doesn't have to be intimidating. Learn more about me.

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